Structure of PDB 4p2q Chain B

Receptor sequence
>4p2qB (length=171) Species: 10090 (Mus musculus) [Search protein sequence]
SRPWFLEYCKSECHFYNGTQRVRLLVRYFYNLEENLRFDSDVGEFRAVTE
LGRPDAENWNSQPEFLEQKRAEVDTVCRHNYEIFDNFLVPRRVEPTVTVY
PLLVCSVSDFYPGNIEVRWFRNGKEEKTGIVSTGLVRNGDWTFQTLVMLE
TVYTCQVEHPSLTDPVTVEWK
3D structure
PDB4p2q Deconstructing the Peptide-MHC Specificity of T Cell Recognition.
ChainB
Resolution3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B S13 L26 D57 W61 E74 V78 H81 N82 I85 F86 S11 L24 D55 W59 E72 V76 H79 N80 I83 F84
Gene Ontology
Biological Process
GO:0006955 immune response
GO:0019882 antigen processing and presentation
Cellular Component
GO:0016020 membrane
GO:0042613 MHC class II protein complex

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4p2q, PDBe:4p2q, PDBj:4p2q
PDBsum4p2q
PubMed24855945
UniProtQ31163

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