Structure of PDB 4oak Chain B

Receptor sequence
>4oakB (length=190) Species: 1353 (Enterococcus gallinarum) [Search protein sequence]
MNTLQLINKNHPLKKNQEPPHLVLAPFSDHDVYLQPEVAKQWERLVRATG
LEKDIRLVSGYRTEKEQRRLWEYSLKENGLAYTKQFVALPGCSEHQIGLA
IDVGLKKQEDDDLICPHFRDSAAADLFMQQMMNYGFILRYPEDKQEITGI
SYEPWHFRYVGLPHSQVITAQKWTLEEYHDYLAQTVRQFA
3D structure
PDB4oak Structural basis for the evolution of vancomycin resistance D,D-peptidases.
ChainB
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CU B H95 D102 H156 H95 D102 H156
BS02 DAL B F86 H95 D102 I114 H156 F86 H95 D102 I114 H156 PDBbind-CN: -logKd/Ki=4.22,Ki=59.7uM
BS03 DAL B R62 F86 A88 S93 H95 Y140 R62 F86 A88 S93 H95 Y140 PDBbind-CN: -logKd/Ki=4.22,Ki=59.7uM
Gene Ontology
Molecular Function
GO:0004180 carboxypeptidase activity
GO:0008233 peptidase activity
GO:0046872 metal ion binding
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:4oak, PDBe:4oak, PDBj:4oak
PDBsum4oak
PubMed24711382
UniProtQ9JN36

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