Structure of PDB 4mw7 Chain B

Receptor sequence
>4mw7B (length=525) Species: 5691 (Trypanosoma brucei) [Search protein sequence]
GPGSMKVEKVFFVTSPIYYVNAAPHIGHVYSTLITDVIGRYHRVKGERVF
ALTGTDEHGQKVAEAAKQKQVSPYDFTTAVAGEFKKCFEQMDYSIDYFIR
TTNEQHKAVVKELWTKLEQKGDIYLGRYEGWYSISDESFLTPQNCKVSLE
SGHVVTWVSEENYMFRLSAFRERLLEWYHANPGCIVPEFRRREVIRAVEK
GLPDLSVSRARATLHNWAIPVPGNPDHCVYVWLDALTNYLTGSRLRVDES
GKEVSLVDDFNELERFPADVHVIGKDILKFHAIYWPAFLLSAGLPLPKKI
VAHGWWTKDRKKISKSLGNVFDPVEKAEEFGYDALKYFLLRESGFSDDGD
YSDKNMIARLNGELADTLGNLVMRCTSAKINVNGEWPSPAAYTEEDESLI
QLIKDLPGTADHYYLIPDIQKAIIAVFDVLRAINAYVTDMAPWKLVKTDP
ERLRTVLYITLEGVRVTTLLLSPILPRKSVVIFDMLGVPEVHRKGIENFE
FGAVPPGTRLGPAVEGEVLFSKRST
3D structure
PDB4mw7 Structures of Trypanosoma brucei Methionyl-tRNA Synthetase with Urea-Based Inhibitors Provide Guidance for Drug Design against Sleeping Sickness.
ChainB
Resolution2.75 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) H256 H259 S364 D367 S390 S393 K554 K557
Catalytic site (residue number reindexed from 1) H25 H28 S133 D136 S148 S151 K312 K315
Enzyme Commision number 6.1.1.10: methionine--tRNA ligase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 2EF B P247 Y250 D287 H289 G290 Y472 V473 W474 D476 L478 I519 F522 H523 P16 Y19 D56 H58 G59 Y230 V231 W232 D234 L236 I277 F280 H281
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0004812 aminoacyl-tRNA ligase activity
GO:0004825 methionine-tRNA ligase activity
GO:0005524 ATP binding
Biological Process
GO:0006418 tRNA aminoacylation for protein translation
GO:0006431 methionyl-tRNA aminoacylation

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Molecular Function
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Biological Process
External links
PDB RCSB:4mw7, PDBe:4mw7, PDBj:4mw7
PDBsum4mw7
PubMed24743796
UniProtQ38C91

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