Structure of PDB 4ldx Chain B

Receptor sequence
>4ldxB (length=337) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
LSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQM
PSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQ
EPEKCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQEL
VATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGE
NEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVFY
KPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEPEKRFSGTIVGVQEN
KSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPL
3D structure
PDB4ldx Structural Basis for DNA Binding Specificity by the Auxin-Dependent ARF Transcription Factors.
ChainB
Resolution2.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B T129 A130 S131 L142 R143 P184 R186 T115 A116 S117 L128 R129 P170 R172
BS02 dna B T135 H136 R181 G182 Q183 T190 T191 T121 H122 R167 G168 Q169 T176 T177
Gene Ontology
Biological Process
GO:0006355 regulation of DNA-templated transcription
GO:0009725 response to hormone
Cellular Component
GO:0005634 nucleus

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4ldx, PDBe:4ldx, PDBj:4ldx
PDBsum4ldx
PubMed24485461
UniProtQ8L7G0|ARFA_ARATH Auxin response factor 1 (Gene Name=ARF1)

[Back to BioLiP]