Structure of PDB 4l9y Chain B

Receptor sequence
>4l9yB (length=264) Species: 272943 (Cereibacter sphaeroides 2.4.1) [Search protein sequence]
SFRLQPAPPARPNRCQLFGPGSRPALFEKMAASAADVINLDLEDSVAPDD
KAQARANIIEAINGLDWGRKYLSVRINGLDTPFWYRDVVDLLEQAGDRLD
QIMIPKVGCAADVYAVDALVTAIERAKGRTKPLSFEVIIESAAGIAHVEE
IAASSPRLQAMSLGAADFAASMGMQTTGIGGTQENYYMLHDGQKHWSDPW
HWAQAAIVAACRTHGILPVDGPFGDFSDDEGFRAQARRSATLGMVGKWAI
HPKQVALANEVFTP
3D structure
PDB4l9y The crystal structures of the tri-functional Chloroflexus aurantiacus and bi-functional Rhodobacter sphaeroides malyl-CoA lyases and comparison with CitE-like superfamily enzymes and malate synthases.
ChainB
Resolution2.102 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 4.1.3.24: malyl-CoA lyase.
4.1.3.25: (S)-citramalyl-CoA lyase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 1VU B F19 L27 K30 M31 R76 A167 I251 P253 F18 L26 K29 M30 R75 A166 I250 P252
BS02 MG B E141 D168 E140 D167
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0003824 catalytic activity
GO:0016829 lyase activity
GO:0043959 L-erythro-3-methylmalyl-CoA lyase activity
GO:0046872 metal ion binding
GO:0047777 (S)-citramalyl-CoA lyase activity
GO:0050083 malyl-CoA lyase activity
Biological Process
GO:0006107 oxaloacetate metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:4l9y, PDBe:4l9y, PDBj:4l9y
PDBsum4l9y
PubMed24206647
UniProtQ3J5L6|MCAL_CERS4 L-malyl-CoA/beta-methylmalyl-CoA lyase (Gene Name=mcl1)

[Back to BioLiP]