Structure of PDB 4l8h Chain B

Receptor sequence
>4l8hB (length=123) Species: 39803 (Qubevirus durum) [Search protein sequence]
AKLETVTLGNIGKDGKQTLVLNPRGVNPTNGVASLSQAGAVRALEKRVTV
SVSQPSRNRKNYKVQVKIQNPTAGVTRQAYADVTFSFTQYSTDEERAFVR
TELAALLASPLLIDAIDQLRPAY
3D structure
PDB4l8h Crystal structure of the bacteriophage q beta coat protein in complex with the RNA operator of the replicase gene.
ChainB
Resolution2.4 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B N58 R59 K60 N61 K63 Q65 K67 Y89 D91 N58 R59 K60 N61 K63 Q65 K67 Y80 D82
BS02 ZN B D102 E103 D93 E94
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005198 structural molecule activity
GO:0030371 translation repressor activity
Biological Process
GO:0006417 regulation of translation
GO:0017148 negative regulation of translation
Cellular Component
GO:0019028 viral capsid
GO:0039617 T=3 icosahedral viral capsid

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4l8h, PDBe:4l8h, PDBj:4l8h
PDBsum4l8h
PubMed24035813
UniProtP03615|CAPSD_BPQBE Capsid protein

[Back to BioLiP]