Structure of PDB 4k79 Chain B

Receptor sequence
>4k79B (length=218) Species: 7757 (Petromyzon marinus) [Search protein sequence]
ACPSQCSCSGTEVNCAGKSLASVPAGIPTTTRVLYLNSNQITKLEPGVFD
RLANLRELHLWGNQLVSLPPGVFDNLANLEKLWLNSNQLTSLPAGLFDRL
VNLEHLGLCCMKLTELPSGAFDKLTRLKQLGLDQNQLKSIPDGAFARLPS
LTHVWLHTNPWDCQCTDILYLSGWVAQHSSIVGEGWPWRHSPDSAKCSGT
NTPVRAVTEASTSPSKCP
3D structure
PDB4k79 Recognition of the thomsen-friedenreich pancarcinoma carbohydrate antigen by a lamprey variable lymphocyte receptor.
ChainB
Resolution2.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GAL B C110 G132 D134 W156 C109 G131 D133 W155
Gene Ontology
Cellular Component
GO:0005615 extracellular space
GO:0031012 extracellular matrix

View graph for
Cellular Component
External links
PDB RCSB:4k79, PDBe:4k79, PDBj:4k79
PDBsum4k79
PubMed23782692
UniProtK0IE77

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