Structure of PDB 4k5u Chain B

Receptor sequence
>4k5uB (length=218) Species: 7757 (Petromyzon marinus) [Search protein sequence]
ACPSQCSCSGTEVNCAGKSLASVPAGIPTTTRVLYLNSNQITKLEPGVFD
RLANLRELHLWGNQLVSLPPGVFDNLANLEKLWLNSNQLTSLPAGLFDRL
VNLEHLGLCCMKLTELPSGAFDKLTRLKQLGLDQNQLKSIPDGAFARLPS
LTHVWLHTNPWDCQCTDILYLSGWVAQHSSIVGEGWPWRHSPDSAKCSGT
NTPVRAVTEASTSPSKCP
3D structure
PDB4k5u Recognition of the thomsen-friedenreich pancarcinoma carbohydrate antigen by a lamprey variable lymphocyte receptor.
ChainB
Resolution1.698 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GAL B N86 G132 D134 W156 N85 G131 D133 W155 MOAD: Ka=9600M^-1
Gene Ontology
Cellular Component
GO:0005615 extracellular space
GO:0031012 extracellular matrix

View graph for
Cellular Component
External links
PDB RCSB:4k5u, PDBe:4k5u, PDBj:4k5u
PDBsum4k5u
PubMed23782692
UniProtK0IE77

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