Structure of PDB 4jdy Chain B

Receptor sequence
>4jdyB (length=264) Species: 1773 (Mycobacterium tuberculosis) [Search protein sequence]
TARVKRGMAEMLKGGVIMDVVTPEQARIAEGAGAVAVMALERVPADIRAQ
GGVSRMSDPDMIEGIIAAVTIPVMAKVRIGHFVEAQILQTLGVDYIDESE
VLTPADYAHHIDKWNFTVPFVCGATNLGEALRRISEGAAMIRSKGEAGTG
DVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPYELVAEVARAGKL
PVTLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKSGAPEHRAAAIVKAT
TFFDDPDVLAKVSR
3D structure
PDB4jdy Crystal structure of Mycobacterium tuberculosis Rv2606c: a pyridoxal biosynthesis lyase.
ChainB
Resolution1.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 4.3.3.6: pyridoxal 5'-phosphate synthase (glutamine hydrolyzing).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GOL B D29 K86 F238 G240 D19 K76 F228 G230
Gene Ontology
Biological Process
GO:0042819 vitamin B6 biosynthetic process
GO:0042823 pyridoxal phosphate biosynthetic process

View graph for
Biological Process
External links
PDB RCSB:4jdy, PDBe:4jdy, PDBj:4jdy
PDBsum4jdy
PubMed23643787
UniProtP9WII9|PDXS_MYCTU Pyridoxal 5'-phosphate synthase subunit PdxS (Gene Name=pdxS)

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