Structure of PDB 4j9v Chain B

Receptor sequence
>4j9vB (length=454) Species: 223926 (Vibrio parahaemolyticus RIMD 2210633) [Search protein sequence]
MKIIILGAGQVGGTLAENLVGENNDITIVDNNADRLRELQDKYDLRVVNG
HASHPDVLHEAGAQDADMLVAVTNTDETNMAACQVAFTLFNTPNRVARIR
SPEYLAEKEALFKSGAIPVDHLIAPEELVTSYIERLIQYPGALQVVSFAE
QKVSLVAVKAYYGGPLVGNALSALREHMPHIDTRVAAIFRQGRPIRPQGT
TIIEADDEVFFVAASNHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKR
LEQTYSVKLIERDYQRAEKLSEQLENTIVFCGDAADQELLTEENIDQVDV
FIALTNEDETNIMSAMLAKRMGAKKVMVLIQRGAYVDLVQGGVIDVAISP
QQATISALLTHVRRADIVNVSSLRRGAAEAIEAVAHGDETTSKVVGRAIG
DIKLPPGTTIGAVVRGEEVLIAHDRTVIEQDDHVVMFLVDKKYVPDVEAL
FQPS
3D structure
PDB4j9v Gating of the TrkH ion channel by its associated RCK protein TrkA.
ChainB
Resolution3.051 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG B Q84 A116 Q84 A116
BS02 AGS B G7 G9 Q10 D30 N31 R35 H51 A52 N74 R98 R100 G7 G9 Q10 D30 N31 R35 H51 A52 N74 R98 R100
BS03 AGS B G239 E261 R262 R266 D283 A284 T305 E307 G239 E261 R262 R266 D283 A284 T305 E307
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0008324 monoatomic cation transmembrane transporter activity
GO:0015079 potassium ion transmembrane transporter activity
GO:0046872 metal ion binding
Biological Process
GO:0006813 potassium ion transport
GO:0071805 potassium ion transmembrane transport
Cellular Component
GO:0005886 plasma membrane

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4j9v, PDBe:4j9v, PDBj:4j9v
PDBsum4j9v
PubMed23598339
UniProtQ87KD2

[Back to BioLiP]