Structure of PDB 4j43 Chain B

Receptor sequence
>4j43B (length=253) Species: 269797 (Methanosarcina barkeri str. Fusaro) [Search protein sequence]
LTPDDLININMQLQKADSAVQEVTGLDIKGICKALYGTFSSSEKVGIVPV
TSGIGNFSASLHAITQYFGFDSFVTDMPDVSGYYEAVQNGAEIILMADDR
TFLAHNLKNGKMANNQPCTGIIYAEIASRYLKADSKDVLVVGLGKVGFPG
AEHLVQKDFRVYGYDADETLLERATSNLGIIPFDPANPKKFSIIFEATPC
ANTIPEAVLSENCVLSTPGIPCAISEELRDKYEVQLIAEPLGIGTASMLY
SVL
3D structure
PDB4j43 Structure and Reaction Mechanism of Pyrrolysine Synthase (PylD).
ChainB
Resolution2.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.4.1.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NAD B N121 T125 G150 K151 V152 Y170 D171 A172 A203 T204 P205 C206 T209 P224 I226 E245 P246 N115 T119 G144 K145 V146 Y164 D165 A166 A197 T198 P199 C200 T203 P218 I220 E239 P240
BS02 MG B Y129 E245 L247 I249 Y123 E239 L241 I243
Gene Ontology
Molecular Function
GO:0016491 oxidoreductase activity
Biological Process
GO:0008652 amino acid biosynthetic process

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Molecular Function
View graph for
Biological Process
External links
PDB RCSB:4j43, PDBe:4j43, PDBj:4j43
PDBsum4j43
PubMed23720358
UniProtQ46E80|PYLD_METBF Pyrrolysine synthase (Gene Name=pylD)

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