Structure of PDB 4j1j Chain B

Receptor sequence
>4j1jB (length=231) Species: 999729 (Leanyer virus) [Search protein sequence]
PDFIYDDRPAAVSSTFNPEKGYMDFITAYGKNINADNVRIFFLNHKKAKD
SLKGSPKVEVDLQFGTLRVKVVNNHNPRNRDNPVADNAITLHRLSGYLAK
WCFDEIDHGQIEEAEVKSKVVIPLAEAKGCKWGDGVALYLAFAPGAEMFL
KDFEFYPLAIDIQRVVKDGMDITFMRKVLKQRYGTKTADDWMISEVTAIQ
SAVKVVAKLPWAKAGFTAAAKNFLAKFNISV
3D structure
PDB4j1j Structure of the Leanyer orthobunyavirus nucleoprotein-RNA complex reveals unique architecture for RNA encapsidation.
ChainB
Resolution2.65 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B A14 A15 S17 S18 L47 K50 K53 N78 H79 D85 T94 H96 L128 E130 R168 M174 F178 K181 Q185 A10 A11 S13 S14 L43 K46 K49 N74 H75 D81 T90 H92 L124 E126 R164 M170 F174 K177 Q181 PDBbind-CN: Kd=0.505uM
Gene Ontology
Cellular Component
GO:0019013 viral nucleocapsid
GO:1990904 ribonucleoprotein complex

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Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:4j1j, PDBe:4j1j, PDBj:4j1j
PDBsum4j1j
PubMed23569220
UniProtF2WAD7

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