Structure of PDB 4j1g Chain B

Receptor sequence
>4j1gB (length=227) Species: 999729 (Leanyer virus) [Search protein sequence]
DFIYDDRPAAVSSTFNPEKGYMDFITAYGKNINADNVRIFFLNHKKAKDS
LKGSPKVEVDLQFGTLRVKVVNNHNPRNRDNPVADNAITLHRLSGYLAKW
CFDEIDHGQIEEAEVKSKVVIPLAEAKGCKWGDGVALYLAFAPGAEMFLK
DFEFYPLAIDIQRVVKDGMDITFMRKVLKQRYGTKTADDWMISEVTAIQS
AVKVVAKLPWAKAGFTAAAKNFLAKFN
3D structure
PDB4j1g Structure of the Leanyer orthobunyavirus nucleoprotein-RNA complex reveals unique architecture for RNA encapsidation.
ChainB
Resolution2.789 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B A15 S17 S18 F20 N21 P22 K50 K53 N78 H79 R84 R97 P127 L128 E130 R168 M174 F178 R180 K181 R186 A10 S12 S13 F15 N16 P17 K45 K48 N73 H74 R79 R92 P122 L123 E125 R163 M169 F173 R175 K176 R181 PDBbind-CN: Kd=0.166uM
Gene Ontology
Cellular Component
GO:0019013 viral nucleocapsid
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:4j1g, PDBe:4j1g, PDBj:4j1g
PDBsum4j1g
PubMed23569220
UniProtF2WAD7

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