Structure of PDB 4i6z Chain B

Receptor sequence
>4i6zB (length=200) Species: 243274 (Thermotoga maritima MSB8) [Search protein sequence]
MLSKRDAILKAAVEVFGKKGYDRATTDEIAEKAGVAKGLIFHYFKNKEEL
YYQAYMSVTEKLQKEFENFLMKNRNRDIFDFMERWIEKKLEYSASHPEEA
DFLITLVSVDEGLRKRILLDLEKSQRVFFDFVREKLKDLDLAEDVTEEIA
LKFLMWFFSGFEEVYLRTYQGKPELLKRDMNTLVEEVKVMLRILKKGMTK
3D structure
PDB4i6z Crystal structure of the transcriptional regulator TM1030 with 24bp DNA oligonucleotide
ChainB
Resolution3.2 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna B K4 A36 G38 L39 H42 Y43 K4 A36 G38 L39 H42 Y43
BS02 dna B T25 T26 F41 N46 K47 T25 T26 F41 N46 K47
Gene Ontology
Molecular Function
GO:0000976 transcription cis-regulatory region binding
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
Biological Process
GO:0006355 regulation of DNA-templated transcription

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:4i6z, PDBe:4i6z, PDBj:4i6z
PDBsum4i6z
PubMed
UniProtQ9X0C0

[Back to BioLiP]