Structure of PDB 4gyo Chain B

Receptor sequence
>4gyoB (length=359) Species: 224308 (Bacillus subtilis subsp. subtilis str. 168) [Search protein sequence]
SEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLM
EFRHRIMLDKLMPVKPFSDMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQ
KNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMNYA
SQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALEHARQ
LEEAYMIAAAYYNVGHCKYSLGDYKEAEGYFKTAAAIFEEHNFQQAVQAV
FSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSG
DLNVLTECFDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMN
IKKKLAEQR
3D structure
PDB4gyo Conformational change-induced repeat domain expansion regulates rap phosphatase quorum-sensing signal receptors.
ChainB
Resolution2.16 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.1.3.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B E147 Y150 H151 K153 Q181 F184 I185 D192 Y217 Y224 N225 H228 F250 Q260 F263 Y297 K300 D332 E135 Y138 H139 K141 Q169 F172 I173 D180 Y205 Y212 N213 H216 F238 Q248 F251 Y285 K288 D320
Gene Ontology
Molecular Function
GO:0004721 phosphoprotein phosphatase activity
GO:0005515 protein binding
Biological Process
GO:0030435 sporulation resulting in formation of a cellular spore
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4gyo, PDBe:4gyo, PDBj:4gyo
PDBsum4gyo
PubMed23526881
UniProtO34327|RAPJ_BACSU Response regulator aspartate phosphatase J (Gene Name=rapJ)

[Back to BioLiP]