Structure of PDB 4gji Chain B

Receptor sequence
>4gjiB (length=421) Species: 316 (Stutzerimonas stutzeri) [Search protein sequence]
FRIAQDVVARENDRRASALKEDYEALGANLARRGVDIEAVTAKVEKFFVA
VPSWGVGTGGTRFARFPGTGEPRGIFDKLDDCAVIQQLTRATPNVSLNIP
WDKADPKELKARGDALGLGFDAMNSNTFSDAPGQAHSYKYGSLSHTNAAT
RAQAVEHNLECIEIGKAIGSKALTVWIGDGSNFPGQSNFTRAFERYLSAM
AEIYKGLPDDWKLFSEHKMYEPAFYSTVVQDWGTNYLIAQTLGPKAQCLV
DLGHHAPNTNIEMIVARLIQFGKLGGFHFNDSKYGDDDLDAGAIEPYRLF
LVFNELVDAEARGVKGFHPAHMIDQSHNVTDPIESLINSANEIRRAYAQA
LLVDRAALSGYQEDNDALMATETLKRAYRTDVEPILAEARRRTGGAVDPV
ATYRASGYRARVAAERPASVA
3D structure
PDB4gji Structure of l-rhamnose isomerase in complex with l-rhamnopyranose demonstrates the sugar-ring opening mechanism and the role of a substrate sub-binding site.
ChainB
Resolution1.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 5.3.1.14: L-rhamnose isomerase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 RM4 B W179 E219 K221 H257 H281 D327 W176 E216 K218 H254 H278 D324
BS02 RNS B W57 W179 E219 K221 H257 H281 D327 W54 W176 E216 K218 H254 H278 D324
BS03 RAM B W57 S329 W54 S326
BS04 RM4 B R5 D83 R414 E418 R2 D80 R411 E415
BS05 MN B E219 D254 H281 D327 E216 D251 H278 D324
BS06 MN B K221 H257 D289 K218 H254 D286
Gene Ontology
Molecular Function
GO:0016853 isomerase activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:4gji, PDBe:4gji, PDBj:4gji
PDBsum4gji
PubMed23772372
UniProtQ75WH8

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