Structure of PDB 4gd9 Chain B

Receptor sequence
>4gd9B (length=131) Species: 1895 (Streptomyces avidinii) [Search protein sequence]
NAESRYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTWSGQYVG
GAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKVKPSAASGGGSAEAGI
TGTWYNQLGSTFIVTAGADGALTGTYESAVG
3D structure
PDB4gd9 Structural consequences of cutting a binding loop: two circularly permuted variants of streptavidin.
ChainB
Resolution1.5 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 BTN B W79 S88 T90 W108 D128 L225 S227 Y243 S245 V247 W31 S40 T42 W60 D80 L108 S110 Y126 S128 V130 BindingDB: Kd=1.000000nM
Gene Ontology

View graph for
Molecular Function
External links
PDB RCSB:4gd9, PDBe:4gd9, PDBj:4gd9
PDBsum4gd9
PubMed23695241
UniProtP22629|SAV_STRAV Streptavidin

[Back to BioLiP]