Structure of PDB 4g41 Chain B

Receptor sequence
>4g41B (length=236) Species: 864568 (Streptococcus pyogenes ATCC 10782) [Search protein sequence]
GAMGSMKIGIIAAMEEELSLLLANLLDAQEHQVLSKTYYTGRFGKHELIL
VQSGVGKVMSAMTVAILVEHFKAQAIINTGSAGAVASHLAIGDVVVADRL
VYHDVDATAFGYAYGQMAGQPLYYDCDPQFVAIFKQVLKHEKTNGQVGLI
ATGDSFVAGQDKIDQIKTAFSNVLAVEMEGAAIAQAAHTAGKPFIVVRAM
SDTAAHDANITFDQFIIEAGKRSAQILMTFLENLPV
3D structure
PDB4g41 Crystal structure of s-adenosylhomocysteine nucleosidase from streptococcus pyogenes in complex with 5-methylthiotubericidin;
ChainB
Resolution1.45 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MTA B M9 V50 S76 A77 G78 F151 V152 E172 M173 E174 S196 D197 F207 M14 V55 S81 A82 G83 F156 V157 E177 M178 E179 S201 D202 F212
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Fri Nov 29 00:56:37 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '4g41', asym_id = 'B', title = 'Crystal structure of s-adenosylhomocysteine nucl...pyogenes in complex with 5-methylthiotubericidin;'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='4g41', asym_id='B', title='Crystal structure of s-adenosylhomocysteine nucl...pyogenes in complex with 5-methylthiotubericidin;')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0003824,0008782,0008930,0009116,0009164,0019509', uniprot = '', pdbid = '4g41', asym_id = 'B'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003824,0008782,0008930,0009116,0009164,0019509', uniprot='', pdbid='4g41', asym_id='B')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>