Structure of PDB 4fzz Chain B

Receptor sequence
>4fzzB (length=166) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
MLRIIDTETCGLQGGIVEIASVDVIDGKIVNPMSHLVRPDRPISPQAMAI
HRITEAMVADKPWIEDVIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTM
KLARRLWPGIKYSNMALYKTRKLNVQTPPGLHHHRALYDCYITAALLIDI
MNTSGWTAEQMADITG
3D structure
PDB4fzz Recognition and processing of double-stranded DNA by ExoX, a distributive 3'-5' exonuclease
ChainB
Resolution2.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.1.11.-
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna B E8 T9 L12 I50 H51 H80 N81 F84 M100 Y112 S113 N114 H134 E8 T9 L12 I50 H51 H80 N81 F84 M100 Y112 S113 N114 H134
BS02 dna B L12 Q13 R104 L12 Q13 R104
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding

View graph for
Molecular Function
External links
PDB RCSB:4fzz, PDBe:4fzz, PDBj:4fzz
PDBsum4fzz
PubMed23771145
UniProtP0AEK0|EXOX_ECOLI Exodeoxyribonuclease 10 (Gene Name=exoX)

[Back to BioLiP]