Structure of PDB 4ej7 Chain B

Receptor sequence
>4ej7B (length=265) Species: 509173 (Acinetobacter baumannii AYE) [Search protein sequence]
QRETSCSRPRLNLDADLYGYRWARDNVGQSGATIYRLYGKPNAPELFLKH
GKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA
FQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRM
NNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIF
DEGKLIGCIDVGRVGIADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNP
DMNKLQFHLMLDEFF
3D structure
PDB4ej7 Structure-guided optimization of protein kinase inhibitors reverses aminoglycoside antibiotic resistance.
ChainB
Resolution2.29 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP B D31 V33 G34 Q35 S36 F53 K55 I101 I215 D216 D25 V27 G28 Q29 S30 F47 K49 I95 I209 D210
BS02 CA B N203 D216 N197 D210
BS03 CA B D165 E269 D159 E263
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Wed Dec 18 18:48:13 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '4ej7', asym_id = 'B', title = 'Structure-guided optimization of protein kinase ...rs reverses aminoglycoside antibiotic resistance.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='4ej7', asym_id='B', title='Structure-guided optimization of protein kinase ...rs reverses aminoglycoside antibiotic resistance.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0005524,0016773,0046677', uniprot = '', pdbid = '4ej7', asym_id = 'B'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0005524,0016773,0046677', uniprot='', pdbid='4ej7', asym_id='B')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>