Structure of PDB 4edh Chain B

Receptor sequence
>4edhB (length=209) Species: 208964 (Pseudomonas aeruginosa PAO1) [Search protein sequence]
SNAMTGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAE
RIRELLLAPSDEPMAADTELLLMFAARAQHLAGVIRPALARGAVVLCDRF
TDATYAYQGGGRGLPEARIAALESFVQGDLRPDLTLVFDLPVEIGLARAR
LDRFEQEDRRFFEAVRQTYLQRAAQAPERYQVLDAGLPLAEVQAGLDRLL
PNLLERLNG
3D structure
PDB4edh The crystal structure of thymidylate kinase from Pseudomonas aeruginosa PAO1 in complex with ADP,TMP and Mg.
ChainB
Resolution1.32 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.4.9: dTMP kinase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 TMP B E12 E39 P40 R50 M70 R74 R96 A100 T101 Y104 Q105 F155 E15 E42 P43 R53 M73 R77 R99 A103 T104 Y107 Q108 F154
BS02 ADP B G13 G15 K16 S17 T18 R145 L190 G16 G18 K19 S20 T21 R148 L189
Gene Ontology
Molecular Function
GO:0004798 thymidylate kinase activity
GO:0005524 ATP binding
GO:0016301 kinase activity
Biological Process
GO:0006227 dUDP biosynthetic process
GO:0006233 dTDP biosynthetic process
GO:0006235 dTTP biosynthetic process
GO:0009165 nucleotide biosynthetic process
GO:0016310 phosphorylation
GO:0046940 nucleoside monophosphate phosphorylation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4edh, PDBe:4edh, PDBj:4edh
PDBsum4edh
PubMed
UniProtQ9HZN8|KTHY_PSEAE Thymidylate kinase (Gene Name=tmk)

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