Structure of PDB 4dgt Chain B

Receptor sequence
>4dgtB (length=387) Species: 272563 (Clostridioides difficile 630) [Search protein sequence]
NYNFNEIVDRSNNFSSKWSEMEKKYGTNDLLPMWVADMDFKAAPCIIDSL
KNRLEQEIYGYTTRPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAIS
LLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMD
YEDIENKIKDVKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDE
IHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPD
EKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNID
FAIKYINENMPKLKVRKPEGTYLLWVDFSALGLSDEELESILVQKGKVAL
NQGNSFGIGGSGYQRINLACPRSMLEEALIRIKNAIN
3D structure
PDB4dgt Crystal structures of putative aminotransferase from Clostridium difficile 630
ChainB
Resolution1.55 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 4.4.1.13: cysteine-S-conjugate beta-lyase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 PLP B G95 V96 I97 Y121 D200 I202 H203 K235 G94 V95 I96 Y120 D199 I201 H202 K234
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0016740 transferase activity
GO:0030170 pyridoxal phosphate binding
GO:0046872 metal ion binding
Biological Process
GO:0009058 biosynthetic process

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Molecular Function
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Biological Process
External links
PDB RCSB:4dgt, PDBe:4dgt, PDBj:4dgt
PDBsum4dgt
PubMed
UniProtQ183G9

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