Structure of PDB 4d7b Chain B

Receptor sequence

>4d7bB (length=116) Species: 9606 (Homo sapiens)

CPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLT
TEEEFVEGIYKVEIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAA
LLSPYSYSTTAVVTNP

3D structure

• PDB: 4d7b Repositioning Tolcapone as a Potent Inhibitor of Transthyretin Amyloidogenesis and its Associated Cellular Toxicity
• Chain: B
• Resolution: 1.15 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	TCW	B	K15 L17 A108 S117	K6 L8 A99 S108	MOAD: Kd=21nM PDBbind-CN: -logKd/Ki=7.68,Kd=21nM BindingDB: Kd=56nM

Gene Ontology

Molecular Function

• GO:0005179 hormone activity
• GO:0005515 protein binding
• GO:0042802 identical protein binding
• GO:0070324 thyroid hormone binding

Biological Process

• GO:0006144 purine nucleobase metabolic process
• GO:0007165 signal transduction

Cellular Component

• GO:0005576 extracellular region
• GO:0005615 extracellular space
• GO:0005737 cytoplasm
• GO:0035578 azurophil granule lumen
• GO:0070062 extracellular exosome

External links

• PDB: RCSB:4d7b, PDBe:4d7b, PDBj:4d7b
• PDBsum: 4d7b
• PubMed: 26902880
• UniProt: P02766|TTHY_HUMAN Transthyretin (Gene Name=TTR)