Structure of PDB 4d4d Chain B

Receptor sequence
>4d4dB (length=343) Species: 1397 (Niallia circulans) [Search protein sequence]
HHHHHSSSDGDTAMKAFNDTFWDPNAKMFWKDSKREKHQDFWVEAELWEL
VMDAYQHTSDPALKAELKTQIDDVYDGTVAKYGQDWTNNPFNDDIMWWAM
GSARAYQITGNPRYLEAARDHFDFVYDTQWDEEFANGGIWWLNSDHNTKN
ACINFPAAQAALYLYDITKDEHYLNAATKIFRWGKTMLTDGNGKVFDRIE
IEHGAVPDATHYNQGTYIGSAVGLYKATGNAVYLDDAVKAAKFTKNHLVD
SNGVLNYEGPNGDLKGGKTILMRNLAHLQKTLDETGQYPEFSAEFDEWLA
FNIEMAWSHQNSDHIVDGNWAGQLLSGTYESWSSAAAVQALNG
3D structure
PDB4d4d Evidence for a Boat Conformation at the Transition State of Gh76 Alpha-1,6-Mannanases- Key Enzymes in Bacterial and Fungal Mannoprotein Metabolism
ChainB
Resolution1.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.101: mannan endo-1,6-alpha-mannosidase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 IFM B W73 D124 D125 Y243 D294 W42 D93 D94 Y212 D263
BS02 MAN B W172 C183 D228 Y243 L295 W141 C152 D197 Y212 L264
Gene Ontology
Biological Process
GO:0005975 carbohydrate metabolic process

View graph for
Biological Process
External links
PDB RCSB:4d4d, PDBe:4d4d, PDBj:4d4d
PDBsum4d4d
PubMed25772148
UniProtQ9Z4P9

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