Structure of PDB 4d4b Chain B

Receptor sequence
>4d4bB (length=343) Species: 1397 (Niallia circulans) [Search protein sequence]
HHHHHSSSDGDTAMKAFNDTFWDPNAKMFWKDSKREKHQDFWVEAELWEL
VMDAYQHTSDPALKAELKTQIDDVYDGTVAKYGQDWTNNPFNDDIMWWAM
GSARAYQITGNPRYLEAARDHFDFVYDTQWDEEFANGGIWWLNSDHNTKN
ACINFPAAQAALYLYDITKDEHYLNAATKIFRWGKTMLTDGNGKVFDRIE
IEHGAVPDATHYNQGTYIGSAVGLYKATGNAVYLDDAVKAAKFTKNHLVD
SNGVLNYEGPNGDLKGGKTILMRNLAHLQKTLDETGQYPEFSAEFDEWLA
FNIEMAWSHQNSDHIVDGNWAGQLLSGTYESWSSAAAVQALNG
3D structure
PDB4d4b Evidence for a Boat Conformation at the Transition State of Gh76 Alpha-1,6-Mannanases- Key Enzymes in Bacterial and Fungal Mannoprotein Metabolism
ChainB
Resolution1.3 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.2.1.101: mannan endo-1,6-alpha-mannosidase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MSX B W172 C183 D228 Y243 W141 C152 D197 Y212
BS02 MAN B D228 D239 T241 D197 D208 T210
Gene Ontology
Biological Process
GO:0005975 carbohydrate metabolic process

View graph for
Biological Process
External links
PDB RCSB:4d4b, PDBe:4d4b, PDBj:4d4b
PDBsum4d4b
PubMed25772148
UniProtQ9Z4P9

[Back to BioLiP]