Structure of PDB 4c03 Chain B

Receptor sequence
>4c03B (length=328) Species: 10090 (Mus musculus) [Search protein sequence]
DQLYYECYSDVSVHEEMIADQVRTEAYRLGILKNWAALRGKTVLDVGAGT
GILSIFCAQAGARRVYAVEASAIWQQAREVVRLNGLEDRVHVLPGPVETV
ELPERVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASAELFV
APISDQMLEWRLGFWSQVKQHYGVDMSCMESFATRCLMGHSEIVVQDLSG
EDVLARPQRFAQLELARAGLEQELEAGVGGRFRCSCYGSAPLHGFAVWFQ
VTFPGGKPLVLSTSPLHPATHWKQALLYLNEPVPVEQDTDISGEITLLPS
PDNPRRLRILLRYKVGDHEEKTKDFAME
3D structure
PDB4c03 Functional Insights from High Resolution Structures of Mouse Protein Arginine Methyltransferase 6.
ChainB
Resolution1.58 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) D66 E158 E167 H320
Catalytic site (residue number reindexed from 1) D20 E112 E121 H271
Enzyme Commision number 2.1.1.319: type I protein arginine methyltransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SFG B Y50 Y51 Y54 M63 R69 G93 A94 L99 E115 A116 P142 V143 E158 M169 S172 Y4 Y5 Y8 M17 R23 G47 A48 L53 E69 A70 P96 V97 E112 M123 S126
Gene Ontology
Molecular Function
GO:0003682 chromatin binding
GO:0005515 protein binding
GO:0008168 methyltransferase activity
GO:0008469 histone arginine N-methyltransferase activity
GO:0016274 protein-arginine N-methyltransferase activity
GO:0035241 protein-arginine omega-N monomethyltransferase activity
GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity
GO:0042054 histone methyltransferase activity
GO:0042393 histone binding
GO:0044020 histone H4R3 methyltransferase activity
GO:0070611 histone H3R2 methyltransferase activity
GO:0070612 histone H2AR3 methyltransferase activity
Biological Process
GO:0000122 negative regulation of transcription by RNA polymerase II
GO:0006281 DNA repair
GO:0006325 chromatin organization
GO:0006338 chromatin remodeling
GO:0010821 regulation of mitochondrion organization
GO:0018216 peptidyl-arginine methylation
GO:0032259 methylation
GO:0036211 protein modification process
GO:0045892 negative regulation of DNA-templated transcription
GO:0090398 cellular senescence
GO:1901796 regulation of signal transduction by p53 class mediator
GO:2000059 negative regulation of ubiquitin-dependent protein catabolic process
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005730 nucleolus

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4c03, PDBe:4c03, PDBj:4c03
PDBsum4c03
PubMed26094878
UniProtQ6NZB1|ANM6_MOUSE Protein arginine N-methyltransferase 6 (Gene Name=Prmt6)

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