Structure of PDB 4ao5 Chain B

Receptor sequence
>4ao5B (length=129) Species: 1423 (Bacillus subtilis) [Search protein sequence]
AMQIKIKYLDETQTRINKMEQGDWIDLRAAEDVAIKKDEFKLVPLGVAME
LPEGYEAHVVPRSSTYKNFGVIQTNSMGVIDESYKGDNDFWFFPAYALRD
TKIKKGDRICQFRIMKKMPAVDLIEVDRL
3D structure
PDB4ao5 Tying Down the Arm in Bacillus Dutpase: Structure and Mechanism
ChainB
Resolution1.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.6.1.23: dUTP diphosphatase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 UMP B N74 G77 I79 Y83 W90 F91 N75 G78 I80 Y84 W91 F92
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0004170 dUTP diphosphatase activity
GO:0016787 hydrolase activity
GO:0042802 identical protein binding
GO:0046872 metal ion binding
Biological Process
GO:0006226 dUMP biosynthetic process
GO:0009117 nucleotide metabolic process
GO:0046081 dUTP catabolic process
Cellular Component
GO:0032991 protein-containing complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:4ao5, PDBe:4ao5, PDBj:4ao5
PDBsum4ao5
PubMed23897460
UniProtO34919|YOSS_BACSU SPbeta prophage-derived deoxyuridine 5'-triphosphate nucleotidohydrolase YosS (Gene Name=yosS)

[Back to BioLiP]