Structure of PDB 4ak7 Chain B

Receptor sequence
>4ak7B (length=373) Species: 310297 (Phocaeicola plebeius) [Search protein sequence]
DTQNYDERKADSLGIPKGNKLSAAMKRAMKWENHDNKWFFEYKMEPLKGD
LAYEEGVVRRDPSAMLKIGDTYYVWYSKSYGPTQGFAGDIEKDKVFPWDR
CDIWYATSKDGLTWKEQGIAVKRGEKGAYDDRSVFTPEVMEWKGKYYLCY
QAVKSPYTVRVKNTIGMACADSPEGLWTKTDKPVLEPSDTGEWEGDEDNR
FKVVSKGDFDSHKVHDPCIIPYNGKFYMYYKGERMGEEITWGGREIKHGV
AIAENPMGPYVKSEYNPISNSGHQVCVWPYKGGIASLITTDGPEKNTLQW
SPDGINFEIMSVVKGAPHAIGLNRSADAEKEPTEILRWGLTHIYNSSDYQ
SIMRFSTWTLQTHTAKGESKERK
3D structure
PDB4ak7 Analysis of Keystone Enzyme in Agar Hydrolysis Provides Insight Into the Degradation (of a Polysaccharide from) Red Seaweeds.
ChainB
Resolution1.8 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) I44
Catalytic site (residue number reindexed from 1) I15
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 47N B W127 T165 Q180 H244 D245 K260 E262 R273 H302 Q303 W98 T136 Q151 H215 D216 K231 E233 R244 H273 Q274
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798 hydrolase activity, acting on glycosyl bonds
Biological Process
GO:0005975 carbohydrate metabolic process

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Molecular Function
View graph for
Biological Process
External links
PDB RCSB:4ak7, PDBe:4ak7, PDBj:4ak7
PDBsum4ak7
PubMed22393053
UniProtB5CY74

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