Structure of PDB 3zmr Chain B

Receptor sequence
>3zmrB (length=462) Species: 28116 (Bacteroides ovatus) [Search protein sequence]
SLEVAQEYRNLEFDARGSRQTIQIDGPAEWHISTSESWCKSSHTIGEGKQ
YVNITVEANDTQKERTATVTVSASGAPDIIINVKQSLYSVPAYDEYIAPD
NTGMRDLTSMQLSALMKAGVNVGNTFEAVIVGNDGSLSGDETCWGNPTPN
KVLFEGIKAAGFDVVRIPVAYSHQFEDAATYKIKSAWMDKVEAAVKAALD
AGLYVIINIHWEGGWLNHPVDANKEALDERLEAMWKQIALRFRDYDDRLL
FAGTNEVNNDDANGAQPTEENYRVQNGFNQVFVNTVRATGGRNHYRHLIV
QAYNTDVAKAVAHFTMPLDIVQNRIFLECHYYDPYDFTIMPNDENFKSQW
GAAFAGGDVSATGQEGDIEATLSSLNVFINNNVPVIIGEYGPTLRDQLTG
EALENHLKSRNDYIEYVVKTCVKNKLVPLYWDAGYTEKLFDRTTGQPHNA
ASIAAIMKGLNL
3D structure
PDB3zmr A Discrete Genetic Locus Confers Xyloglucan Metabolism in Select Human Gut Bacteroidetes
ChainB
Resolution1.43 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.2.1.151: xyloglucan-specific endo-beta-1,4-glucanase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GLO B H251 N296 E297 E430 W472 H210 N255 E256 E389 W431
BS02 BGC B N165 W472 N124 W431
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008422 beta-glucosidase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity
Biological Process
GO:0000272 polysaccharide catabolic process
GO:0009251 glucan catabolic process
GO:0085030 symbiotic process benefiting host
GO:2000899 xyloglucan catabolic process
Cellular Component
GO:0005576 extracellular region
GO:0009279 cell outer membrane
GO:0009986 cell surface

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3zmr, PDBe:3zmr, PDBj:3zmr
PDBsum3zmr
PubMed24463512
UniProtA7LXT7|BGH5A_BACO1 Xyloglucan-specific endo-beta-1,4-glucanase BoGH5A (Gene Name=BACOVA_02653)

[Back to BioLiP]