Structure of PDB 3zfs Chain B

Receptor sequence
>3zfsB (length=215) Species: 145263 (Methanothermobacter marburgensis) [Search protein sequence]
KPRIGYIHLSGCTGDAMSLTENYDILAELLTNMVDIVYGQTLVDLWEMPE
MDLALVEGSVCLQDEHSLHELKELREKAKLVCAFGSCAATGCFTRYSRGG
QQAQPSHESFVPIADLIDVDLALPGCPPSPEIIAKTVVALLNAGYTEACG
CDLQTKVVNQGLCIGCGTCAMACQTRALDMTNGRPELNSDRCIKCGICYV
QCPRSWWPEEQIKKE
3D structure
PDB3zfs De Novo Modeling of the F420-Reducing [Nife]-Hydrogenase from a Methanogenic Archaeon by Cryo-Electron Microscopy
ChainB
Resolution4.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.12.98.1: coenzyme F420 hydrogenase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SF4 B C57 G59 C132 C12 G14 C87
BS02 SF4 B K251 C252 K194 C195
BS03 SF4 B G222 C223 G224 T225 C226 G165 C166 G167 T168 C169
Gene Ontology
Molecular Function
GO:0016151 nickel cation binding
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
GO:0050454 coenzyme F420 hydrogenase activity
GO:0050660 flavin adenine dinucleotide binding
GO:0051536 iron-sulfur cluster binding
GO:0051539 4 iron, 4 sulfur cluster binding

View graph for
Molecular Function
External links
PDB RCSB:3zfs, PDBe:3zfs, PDBj:3zfs
PDBsum3zfs
PubMed23483797
UniProtD9PYF7

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