Structure of PDB 3vzy Chain B

Receptor sequence
>3vzyB (length=228) Species: 224308 (Bacillus subtilis subsp. subtilis str. 168) [Search protein sequence]
MYDVTEWKHVFKLDPNKDLPDEQLEILCESGTDAVIIGGSDGVTEDNVLR
MMSKVRRFLVPCVLEVSAIEAIVPGFDLYFIPSVLNSKNADWIVGMHQKA
MKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSE
LLQLPIFYLEYSGVLGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE
HADVIVVGNAVYEDFDRALKTVAAVKGE
3D structure
PDB3vzy Insights into TIM-barrel prenyl transferase mechanisms: crystal structures of PcrB from Bacillus subtilis and Staphylococcus aureus
ChainB
Resolution1.63 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.5.1.n9: heptaprenylglyceryl phosphate synthase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 1GP B K12 Y158 E160 S162 G163 G186 G208 N209 K12 Y158 E160 S162 G163 G186 G208 N209
BS02 MG B R56 F58 R56 F58
BS03 MG B E45 D46 E45 D46
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0002094 polyprenyltransferase activity
GO:0016740 transferase activity
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0046872 metal ion binding
Biological Process
GO:0006650 glycerophospholipid metabolic process
GO:0008654 phospholipid biosynthetic process
GO:0046474 glycerophospholipid biosynthetic process

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Molecular Function
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Biological Process
External links
PDB RCSB:3vzy, PDBe:3vzy, PDBj:3vzy
PDBsum3vzy
PubMed23322418
UniProtO34790|PCRB_BACSU Heptaprenylglyceryl phosphate synthase (Gene Name=pcrB)

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