Structure of PDB 3veb Chain B

Receptor sequence
>3vebB (length=150) Species: 632 (Yersinia pestis) [Search protein sequence]
MKYQQLENLESGWKWAYLVKKHREGEAITRHIENSAAQDAVEQLMKLENE
PVKVQEWIDAHMNVNLATRMKQTIRARRKRHFNAEHQHTRKKSIDLEFLV
WQRLAVLARRRGNTLSDTVVQLIEDAERKEKYASQMSSLKQDLKDILDKE
3D structure
PDB3veb Molecular basis for a protein-mediated DNA-bridging mechanism that functions in condensation of the E. coli chromosome.
ChainB
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B Y16 Q18 R88 R91 K92 W114 L128 Y3 Q5 R75 R78 K79 W101 L115
BS02 dna B Y30 K33 K34 R82 Q85 T86 R90 R93 K105 Y17 K20 K21 R69 Q72 T73 R77 R80 K92
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0006355 regulation of DNA-templated transcription
GO:0051301 cell division
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3veb, PDBe:3veb, PDBj:3veb
PDBsum3veb
PubMed23084832
UniProtQ8ZG78|MATP_YERPE Macrodomain Ter protein (Gene Name=matP)

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