Structure of PDB 3v11 Chain B

Receptor sequence
>3v11B (length=254) Species: 273057 (Saccharolobus solfataricus P2) [Search protein sequence]
MIYSRSKLPSEGEILIATVKQVFDYGSYVSLDEYGGLQAFLPWSEVSNIR
DVLKENRKVIVKVIRVDRRKGTVDVSLKKVTDDERRKKNLQWKKIQRLDK
ILELVSQKLKLSEKDAWEQVAWKLEAKYGDPITAIEKAVKEGEKILIDAG
VPEIWVKPLLEEASRKVKMSGLITVRTNEPLGVEKIKEVISKALENIEQD
YESLLNIKIYTIGAPRYRVDVVGTNPKEASEALNQIISNLIKIGKEENVD
ISVV
3D structure
PDB3v11 Structure of the ternary initiation complex aIF2-GDPNP-methionylated initiator tRNA.
ChainB
Resolution5.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B N53 R62 N94 W97 Q101 K105 N48 R57 N89 W92 Q96 K100 PDBbind-CN: Kd=1nM
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003743 translation initiation factor activity
GO:0005515 protein binding
GO:0043022 ribosome binding
Biological Process
GO:0006412 translation
GO:0006413 translational initiation

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:3v11, PDBe:3v11, PDBj:3v11
PDBsum3v11
PubMed22447243
UniProtQ97Z79|IF2A_SACS2 Translation initiation factor 2 subunit alpha (Gene Name=eif2a)

[Back to BioLiP]