Structure of PDB 3ubo Chain B

Receptor sequence
>3uboB (length=327) Species: 382 (Sinorhizobium meliloti) [Search protein sequence]
AKYDVLTIGNAIVDIIARCDDSFLEENGIIKGAMNLINADRAELLYSRMG
PAVEASGGSAGNTAAGVASLGGRAAYFGKVADDQLGEIFTHDIRAQGVHF
QTKPLDGHPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEDDVVAQSK
VTYFEGYLWDPPRAKDAIREAARIAHAHGRETAMTLSDSFCVHRYRSEFL
ELMRSGTVDIVFANRQEALALYETEDFDRALELLARDCKLAAVTLSEEGS
VVVRGAERVRVGASVLEQVVDTTGAGDLYAAGFLFGYTSGRSLEECSKLG
NLAAGIVIGQIGPRPLVSLATAARQAA
3D structure
PDB3ubo The crystal structure of adenosine kinase from Sinorhizobium meliloti
ChainB
Resolution2.601 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) R125 G275 A276 G277 D278
Catalytic site (residue number reindexed from 1) R124 G274 A275 G276 D277
Enzyme Commision number 2.7.1.4: fructokinase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 ADN B N11 I13 D15 G59 S60 M127 T129 E156 Y158 G275 D278 P314 N10 I12 D14 G58 S59 M126 T128 E155 Y157 G274 D277 P313
BS02 ADP B N215 T245 S247 E248 G250 A264 L267 A276 N302 A305 I309 N214 T244 S246 E247 G249 A263 L266 A275 N301 A304 I308
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0008865 fructokinase activity
GO:0016301 kinase activity
GO:0016772 transferase activity, transferring phosphorus-containing groups
Biological Process
GO:0016310 phosphorylation
GO:0046835 carbohydrate phosphorylation

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:3ubo, PDBe:3ubo, PDBj:3ubo
PDBsum3ubo
PubMed
UniProtQ92T17

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