Structure of PDB 3ubg Chain B

Receptor sequence
>3ubgB (length=310) Species: 7227 (Drosophila melanogaster) [Search protein sequence]
AVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVETNGA
VRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVND
EPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHNIHYFIVRDRTG
GRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEE
RLSIVGGKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFADREIRYTLK
AQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGGFST
SVDLTIRVTD
3D structure
PDB3ubg Crystal structures of Drosophila N-cadherin ectodomain regions reveal a widely used class of Ca2+-free interdomain linkers.
ChainB
Resolution2.502 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA B E450 D496 E498 D538 E539 E12 D58 E60 D100 E101
BS02 CA B E450 E498 D535 V536 D538 D573 E12 E60 D97 V98 D100 D135
BS03 CA B N537 E539 D571 D573 D622 Q633 N99 E101 D133 D135 D184 Q195
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
Biological Process
GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules
Cellular Component
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3ubg, PDBe:3ubg, PDBj:3ubg
PDBsum3ubg
PubMed22171007
UniProtO15943|CADN_DROME Neural-cadherin (Gene Name=CadN)

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