Structure of PDB 3sit Chain B

Receptor sequence
>3sitB (length=161) Species: 31578 (Porcine rotavirus (serotype 3 / strain CRW-8)) [Search protein sequence]
LLDGPYQPTTFNPPTSYWILLAPTVEGVVIQGTNNIDRWLATILIEPNVQ
TTNRIYNLFGQQVTLSVENTSQTQWKFIDVSKTTPTGNYTQHGPLFSTPK
LYAVMKFSGRIYTYNGTTPNATTGYYSTTNYDTVNMTSFCDFYIIPRNQE
EKCTEYINHGL
3D structure
PDB3sit Novel structural insights into rotavirus recognition of ganglioside glycan receptors.
ChainB
Resolution1.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SIA B R101 H155 Y188 Y189 S190 R38 H92 Y125 Y126 S127
Gene Ontology
Biological Process
GO:0019058 viral life cycle
Cellular Component
GO:0019028 viral capsid

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Biological Process
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Cellular Component
External links
PDB RCSB:3sit, PDBe:3sit, PDBj:3sit
PDBsum3sit
PubMed21945555
UniProtP0C6Y8|VP4_ROTP3 Outer capsid protein VP4

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