Structure of PDB 3s6y Chain B

Receptor sequence
>3s6yB (length=295) Species: 10886 (Mammalian orthoreovirus 3 Dearing) [Search protein sequence]
SGRPVLNQGVTSAGAPLSIRNNRMTMGLNDGLTLSGNNLAIRLPGNTGLN
IQNGGLQFRFNTDQFQIVNNNLTLKTTVFDSINSRIGAIEQSYVASAVTP
LRLNSSTKVLDMLIDSSTLEINSSGQLTVRSTSPNLRYPIADVSGGIGMS
PNYRFRQSMWIGIVSYSGSGLNWRVQVNSDIFIVDDYIHICLPAFDGFSI
ADGGDLSLNFVTGLLPPLLTGDTEPAFHNDVVTYGAQTVAIGLSSGGTPQ
YMSKNLWVEQWQDGVLRLRVEGGGSITHSNSKWPAMTVSYPRSFT
3D structure
PDB3s6y Crystal structure of reovirus attachment protein sigma1 in complex with sialylated oligosaccharides
ChainB
Resolution2.79 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SIA B I201 R202 L203 G205 N210 I41 R42 L43 G45 N50
Gene Ontology
Molecular Function
GO:0003700 DNA-binding transcription factor activity
Biological Process
GO:0006355 regulation of DNA-templated transcription
GO:0007155 cell adhesion
GO:0019058 viral life cycle
GO:0019062 virion attachment to host cell

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Molecular Function
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Biological Process
External links
PDB RCSB:3s6y, PDBe:3s6y, PDBj:3s6y
PDBsum3s6y
PubMed21829363
UniProtP03528|SIGM1_REOVD Outer capsid protein sigma-1 (Gene Name=S1)

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