Structure of PDB 3rwm Chain B

Receptor sequence
>3rwmB (length=179) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
MGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTI
EVENKKIKAQIWDTAGLERYRAITSAYYRGAVGALIVYDISKSSSYENCN
HWLTELRENADDNVAVGLIGNKSDLAHLRAVPTDEAKNFAMENQMLFTET
SALNSDNVDKAFRELIVAIFQMVSKHQVD
3D structure
PDB3rwm The activation cycle of Rab GTPase Ypt32 reveals structural determinants of effector recruitment and GDI binding.
ChainB
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GNP B S22 G23 G25 K26 S27 N28 F38 N39 I40 S42 S44 T45 A70 K127 D129 L130 S156 L158 S17 G18 G20 K21 S22 N23 F33 N34 I35 S37 S39 T40 A65 K122 D124 L125 S151 L153
BS02 MG B S27 T45 S22 T40
BS03 GNP B G7 D9 K61 G2 D4 K56
Gene Ontology
Molecular Function
GO:0003924 GTPase activity
GO:0005525 GTP binding

View graph for
Molecular Function
External links
PDB RCSB:3rwm, PDBe:3rwm, PDBj:3rwm
PDBsum3rwm
PubMed22024479
UniProtP51996|YPT32_YEAST GTP-binding protein YPT32/YPT11 (Gene Name=YPT32)

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