Structure of PDB 3qb0 Chain B

Receptor sequence
>3qb0B (length=430) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
VYGGDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADEGNKKIF
SEQSIGIPRKDYELKPIIENGLVIDWDTAQEQWQWALQNELYLNSNSGIP
ALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLV
VDIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLF
AIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECKETLCHICPTKTLEE
TKTELSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRS
NSGVVKTWRNDYVPLKRTKPNELIGLADLVYSSIMSSDVDLRATLAHNVV
LTGGTSSIPGLSDRLMTELNKILPSLKFRILTTGHTIERQYQSWLGGSIL
TSLGTFHQLWVGKKEYEEVGVERLLNDRFR
3D structure
PDB3qb0 Structural biochemistry of nuclear actin-related proteins 4 and 8 reveals their interaction with actin.
ChainB
Resolution3.404 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP B G22 S23 Y24 T25 G161 H162 Q240 K243 G413 T414 S416 Q449 G15 S16 Y17 T18 G154 H155 Q233 K236 G354 T355 S357 Q390
Gene Ontology
Molecular Function
GO:0003682 chromatin binding
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0042393 histone binding
Biological Process
GO:0006281 DNA repair
GO:0006325 chromatin organization
GO:0006338 chromatin remodeling
GO:0006351 DNA-templated transcription
GO:0006355 regulation of DNA-templated transcription
GO:0006357 regulation of transcription by RNA polymerase II
GO:0051382 kinetochore assembly
Cellular Component
GO:0000785 chromatin
GO:0000812 Swr1 complex
GO:0005634 nucleus
GO:0016514 SWI/SNF complex
GO:0031011 Ino80 complex
GO:0035267 NuA4 histone acetyltransferase complex
GO:0043232 intracellular non-membrane-bounded organelle

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3qb0, PDBe:3qb0, PDBj:3qb0
PDBsum3qb0
PubMed21499228
UniProtP80428|ARP4_YEAST Actin-related protein 4 (Gene Name=ARP4)

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