Structure of PDB 3q8d Chain B

Receptor sequence
>3q8dB (length=232) Species: 562 (Escherichia coli) [Search protein sequence]
EGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQ
PFTPLLLRFGGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLE
YETRFSELFFDYLHCIQSLAGVTGTPEPALRRFELALLGHLGYGVNFTHC
AGSGEPVDDTMTYRYREEKGFIASVVIDNKTFTGRQLKALNAREFPDADT
LRAAKRFTRMALKPYLGGKPLKSRELFRQFMP
3D structure
PDB3q8d Mechanism of RecO recruitment to DNA by single-stranded DNA binding protein.
ChainB
Resolution2.3 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B E128 R132 K206 R210 R225 E127 R131 K205 R209 R224
Gene Ontology
Molecular Function
GO:0005515 protein binding
Biological Process
GO:0000725 recombinational repair
GO:0006281 DNA repair
GO:0006302 double-strand break repair
GO:0006310 DNA recombination
GO:0009411 response to UV
Cellular Component
GO:0043590 bacterial nucleoid

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3q8d, PDBe:3q8d, PDBj:3q8d
PDBsum3q8d
PubMed21504984
UniProtP0A7H3|RECO_ECOLI DNA repair protein RecO (Gene Name=recO)

[Back to BioLiP]