Structure of PDB 3pso Chain B

Receptor sequence
>3psoB (length=182) Species: 10090 (Mus musculus) [Search protein sequence]
MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLK
TLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLA
LLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSF
VLMDIQASTVVTYVYQLIGDDVKVERIEYKKS
3D structure
PDB3pso Conformational dynamics and biomolecular interactions of VPS29 studied by NMR and X-ray crystallography
ChainB
Resolution3.2 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B D8 H10 H117 D8 H10 H117
BS02 ZN B D62 H86 H115 D62 H86 H115
BS03 ZN B H33 D55 H57 H33 D55 H57
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0046872 metal ion binding
Biological Process
GO:0006896 Golgi to vacuole transport
GO:0015031 protein transport
GO:0032456 endocytic recycling
GO:0042147 retrograde transport, endosome to Golgi
Cellular Component
GO:0005737 cytoplasm
GO:0005768 endosome
GO:0005829 cytosol
GO:0010008 endosome membrane
GO:0016020 membrane
GO:0030904 retromer complex
GO:0030906 retromer, cargo-selective complex
GO:0043231 intracellular membrane-bounded organelle

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3pso, PDBe:3pso, PDBj:3pso
PDBsum3pso
PubMed
UniProtQ9QZ88|VPS29_MOUSE Vacuolar protein sorting-associated protein 29 (Gene Name=Vps29)

[Back to BioLiP]