Structure of PDB 3ppe Chain B

Receptor sequence
>3ppeB (length=203) Species: 9031 (Gallus gallus) [Search protein sequence]
DWIWNRMHIREEIDSPLPHHVGKLTSSVGNKNAMYIIEGESANTIFKVQG
YDGDIYAFERLDREKKAEYELTAHIIDRRNNRSLEPPSKFIIKVSDINDN
APIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGN
EYFTVDDSGVIFTARADLDRESQSAYEIIVKAKDALGLTGESSTATVIIR
LTD
3D structure
PDB3ppe Structure and binding mechanism of vascular endothelial cadherin: a divergent classical cadherin.
ChainB
Resolution2.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA B E11 E12 D62 E64 D99 E11 E12 D62 E64 D99
BS02 CA B N98 N100 D130 D132 H139 D184 N98 N100 D130 D132 H139 D184
BS03 CA B E11 E64 D96 I97 D99 D132 E11 E64 D96 I97 D99 D132
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
Biological Process
GO:0007155 cell adhesion
GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules
GO:0098609 cell-cell adhesion
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3ppe, PDBe:3ppe, PDBj:3ppe
PDBsum3ppe
PubMed21269602
UniProtQ8AYD0|CADH5_CHICK Cadherin-5 (Gene Name=CDH5)

[Back to BioLiP]