Structure of PDB 3p0i Chain B

Receptor sequence
>3p0iB (length=536) Species: 5664 (Leishmania major) [Search protein sequence]
HHMNTDERYKLLRSVGEECIQESELRNLIEKKPLIRCYDGFEPSGRMHIA
QGIFKAVNVNKCTAAGCEFVFWVADWFALMNDKVGGELEKIRIVGRYLIE
VWKAAGMDMDKVLFLWSSEEITSHADTYWRMVLDIGRQNTIARIKKCCTI
MGKTEGTLTAAQVLYPLMQCCDIFFLKADICQLGLDQRKVNMLAREYCDL
IGRKLKPVILSHHMLAGLKQGQAKMSKSDPDSAIFMEDTEEDVARKIRQA
YCPRVKQSASAITDDGAPVATDDRNPVLDYFQCVVYARPGAAATIDGTTY
ATYEDLEQAFVSDEVSEDALKSCLIDEVNALLEPVRQHFASNEEAHELLE
AVKSYRKALPAAPAKPHACMWMPALLKVPLDVAEGMIKVTKDFIAAHPEG
TVTLVLPDWSAVASDEITGVEKDISAALQVNCALLKAYGLPSSVKIVTEN
EVILGNCDDFWVSVIGIARKNLLSHVEELYGGEVRNAGQVIAALMRVATA
LMLSVSHVISTSLDGHINAFAREYTKERIDCVQTLE
3D structure
PDB3p0i The Double-Length Tyrosyl-tRNA Synthetase from the Eukaryote Leishmania major Forms an Intrinsically Asymmetric Pseudo-Dimer.
ChainB
Resolution3.13 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 6.1.1.1: tyrosine--tRNA ligase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 TYE B Y36 G38 W70 F75 Y163 Q167 D170 L181 Q185 Y38 G40 W72 F77 Y165 Q169 D172 L183 Q187
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0004812 aminoacyl-tRNA ligase activity
GO:0004831 tyrosine-tRNA ligase activity
GO:0005524 ATP binding
Biological Process
GO:0006412 translation
GO:0006418 tRNA aminoacylation for protein translation
GO:0006437 tyrosyl-tRNA aminoacylation
Cellular Component
GO:0005737 cytoplasm
GO:0097014 ciliary plasm

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3p0i, PDBe:3p0i, PDBj:3p0i
PDBsum3p0i
PubMed21420975
UniProtQ4QFJ7

[Back to BioLiP]