Structure of PDB 3omg Chain B

Receptor sequence
>3omgB (length=216) Species: 9606 (Homo sapiens) [Search protein sequence]
YKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDIASHPPVEGSYAPR
RGEFCIAKFVDGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLS
PAFSTRVLPAQATEYAFAFIQVPQDDDARTDAVDSVVRDIQNTQCLLNVE
HLSAGCPHVTLQFADSKGDVGLGLVKEGLVMVEVRKEKQFQKVITEYLNA
QESAKSARLNLWRYGD
3D structure
PDB3omg Structural basis for recognition of arginine methylated Piwi proteins by the extended Tudor domain.
ChainB
Resolution1.85 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.31.1: micrococcal nuclease.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B F686 F740 D742 Y746 Y763 Y766 N768 N823 Q825 F5 F59 D61 Y65 Y82 Y85 N87 N142 Q144
External links
PDB RCSB:3omg, PDBe:3omg, PDBj:3omg
PDBsum3omg
PubMed20937909
UniProtQ7KZF4|SND1_HUMAN Staphylococcal nuclease domain-containing protein 1 (Gene Name=SND1)

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