Structure of PDB 3ngj Chain B

Receptor sequence
>3ngjB (length=218) Species: 5759 (Entamoeba histolytica) [Search protein sequence]
MDKATLAKYIDHTLLKADATEEQIRKLCSEAAEYKFASVCVNPTWVPLCA
ELLKGTGVKVCTVIGFPLGATPSEVKAYETKVAVEQGAEEVDMVINIGMV
KAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKRCVAAGA
EYVKTSTGFGTHGATPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMINN
GASRIGASAGIAILNGIH
3D structure
PDB3ngj Crystal structure of a putative deoxyribose-phosphate aldolase from Entamoeba histolytica
ChainB
Resolution1.7 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) D92 K154 K183
Catalytic site (residue number reindexed from 1) D92 K154 K183
Enzyme Commision number 4.1.2.4: deoxyribose-phosphate aldolase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B D192 H218 D192 H218
BS02 ZN B C40 C61 D92 C40 C61 D92
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0004139 deoxyribose-phosphate aldolase activity
GO:0016829 lyase activity
GO:0046872 metal ion binding
Biological Process
GO:0009264 deoxyribonucleotide catabolic process
GO:0016052 carbohydrate catabolic process
GO:0046386 deoxyribose phosphate catabolic process
Cellular Component
GO:0005737 cytoplasm

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External links
PDB RCSB:3ngj, PDBe:3ngj, PDBj:3ngj
PDBsum3ngj
PubMed
UniProtC4M5C6

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