Structure of PDB 3ngb Chain B

Receptor sequence

>3ngbB (length=224) Species: 9606 (Homo sapiens) [Search protein sequence]

QVQLVQSGGQMKKPGESMRISCRASGYEFIDCTLNWIRLAPGKRPEWMGW
LKPRGGAVNYARPLQGRVTMTRDVYSDTAFLELRSLTVDDTAVYFCTRGK
NCDYNWDFEHWGRGTPVIVSSPSTKGPSVFPLAPSSKSTSGGTAALGCLV
KDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQ
TYICNVNHKPSNTKVDKKAEPKSC

3D structure

PDB

3ngb Structural basis for broad and potent neutralization of HIV-1 by antibody VRC01.

Chain

Resolution

2.68 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	BGC	B	K96 E101	K100 E109
BS02	BGC	B	Y27 R94 C98	Y27 R98 C102

External links

PDB	RCSB:3ngb, PDBe:3ngb, PDBj:3ngb
PDBsum	3ngb
PubMed	20616231

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