Structure of PDB 3nc3 Chain B

Receptor sequence
>3nc3B (length=385) Species: 1423 (Bacillus subtilis) [Search protein sequence]
IKLFSVLSDQFQNNPYAYFSQLREEDPVHYEESIDSYFISRYHDVRYILQ
HPDIFTTKSLVERAEPVMRGPSAKRRIVVRSFIGDALDHLSPLIKQNAEN
LLAPYLERGKSDLVNDFGKTFAVCVTMDMLGLDKRDHEKISEWHSGVADF
ITSISQSPEARAHSLWCSEQLSQYLMPVIKERRVNPGSDLISILCTSALS
DKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADRSLVPRA
IAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFE
QPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANI
VLDKMRNIRLEEDFCYAESGLYTRGPVSLLVAFDG
3D structure
PDB3nc3 Structural and biochemical characterization of the cytochrome P450 CypX (CYP134A1) from Bacillus subtilis: a cyclo-L-leucyl-L-leucyl dipeptide oxidase.
ChainB
Resolution2.66 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) D163 A233 E236 P237 A238 C353 V354 G355 E362 T392
Catalytic site (residue number reindexed from 1) D149 A214 E217 P218 A219 C334 V335 G336 E343 T373
Enzyme Commision number 1.14.15.13: pulcherriminic acid synthase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 HEM B S63 M143 N229 A233 A234 P237 V280 I283 A345 F346 H351 C353 V354 G355 F358 A359 S59 M129 N210 A214 A215 P218 V261 I264 A326 F327 H332 C334 V335 G336 F339 A340
Gene Ontology
Molecular Function
GO:0004497 monooxygenase activity
GO:0005506 iron ion binding
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen
GO:0020037 heme binding
GO:0046872 metal ion binding
Biological Process
GO:0046148 pigment biosynthetic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:3nc3, PDBe:3nc3, PDBj:3nc3
PDBsum3nc3
PubMed20690619
UniProtO34926|CYPX_BACSU Pulcherriminic acid synthase (Gene Name=cypX)

[Back to BioLiP]