Structure of PDB 3n0i Chain B

Receptor sequence
>3n0iB (length=185) Species: 52275 (Human adenovirus D37) [Search protein sequence]
YDTRTLWTTPDTSPNCTIAQDKDSKLTLVLTKCGSQILANVSLIVVAGKY
HIINNKTNPKIKSFTIKLLFNKNGVLLDNSNLGKAYWNFRSGNSNVSTAY
EKAIGFMPNLVAYPKPSNSKKYARDIVYGTIYLGGKPDQPAVIKTTFNQE
TGCEYSITFNFSWSKTYENVEFETTSFTFSYIAQE
3D structure
PDB3n0i The GD1a glycan is a cellular receptor for adenoviruses causing epidemic keratoconjunctivitis.
ChainB
Resolution1.65 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 SIA B Y312 P317 D318 K345 Y132 P137 D138 K165
BS02 ZN B H231 E351 H51 E171
Gene Ontology
Biological Process
GO:0007155 cell adhesion
GO:0019058 viral life cycle
GO:0019062 virion attachment to host cell
Cellular Component
GO:0019028 viral capsid

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:3n0i, PDBe:3n0i, PDBj:3n0i
PDBsum3n0i
PubMed21151139
UniProtQ64823

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