Structure of PDB 3kw2 Chain B

Receptor sequence
>3kw2B (length=238) Species: 431947 (Porphyromonas gingivalis ATCC 33277) [Search protein sequence]
LPLFYAPDIEQSDRLPDDEAGHILRVLRMQAGDRLRLTDGRGSFFDAVIE
TADRKSCYVSVCGQESWQKPWRDRITIAIAPTKQSERMEWMLEKLVEIGV
DEVVFIESEHSERRRIKAERLERIAISAMKQSLKASFPVIRVNIPIQTVI
ADTPKAAVRLIAYVDEAVRGRGYPSDFYHVGQDVLILIGPEGDFSPSEVE
SALLAGFAPVSLGESRLRTETAGLVACQWIHTLQACYR
3D structure
PDB3kw2 Crystal structure of probable rRNA-methyltransferase from Porphyromonas gingivalis
ChainB
Resolution2.0 Å
3D
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Enzymatic activity
Enzyme Commision number 2.1.1.193: 16S rRNA (uracil(1498)-N(3))-methyltransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ADN B A164 Y165 V166 I195 G196 P197 D200 S218 L219 A229 A162 Y163 V164 I188 G189 P190 D193 S211 L212 A222
Gene Ontology
Molecular Function
GO:0008168 methyltransferase activity
GO:0070042 rRNA (uridine-N3-)-methyltransferase activity
Biological Process
GO:0006364 rRNA processing
GO:0032259 methylation
GO:0070475 rRNA base methylation
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3kw2, PDBe:3kw2, PDBj:3kw2
PDBsum3kw2
PubMed
UniProtB2RH75

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