Structure of PDB 3kd6 Chain B

Receptor sequence
>3kd6B (length=298) Species: 1097 (Chlorobaculum tepidum) [Search protein sequence]
SLLVIGSLAFDDIETPFGRSDNTLGGSSTYIALSASYFTDEPIRMVGVVG
SDFGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQL
NVFAEFDPHVPQYYRDSKFVCLGNIDPELQLKVLDQIDDPKLVVCDTMNF
WIEGKPEELKKVLARVDVFIVNDSEARLLSGDPNLVKTARIIREMGPKTL
IIKKGEHGALLFTDNGIFAAPAFPLESIYDPTGAGDTFAGGFIGHLARCG
NTSEAEMRKAVLYGSAMASFCVEQFGPYRYNDLDLLEVDDRYQSFLEL
3D structure
PDB3kd6 Crystal Structure of Nucleoside Kinase from Chlorobium tepidum in Complex with AMP
ChainB
Resolution1.88 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) G234 A235 G236 D237
Catalytic site (residue number reindexed from 1) G233 A234 G235 D236
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AMP B S8 D12 G27 F81 W83 R94 N125 M149 F151 W152 G234 D237 S7 D11 G26 F80 W82 R93 N124 M148 F150 W151 G233 D236
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0016301 kinase activity
GO:0016772 transferase activity, transferring phosphorus-containing groups
Biological Process
GO:0016310 phosphorylation
Cellular Component
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3kd6, PDBe:3kd6, PDBj:3kd6
PDBsum3kd6
PubMed
UniProtQ8KDR9

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